| miRdSNP v11.03 Summary | |
| 3'UTR RefSeq Genes: | 19,834 |
| 3'UTR SNPs: | 175,351 |
| dSNPs: | 630 |
| Disease-SNP pairs: | 786 |
| Diseases: | 204 |
| PubMed IDs: | 754 |
| TargetScan miRNA Targets: | 117,929 |
| PicTar 4-way miRNA Targets: | 62,483 |
| PicTar 5-way miRNA Targets: | 23,248 |
| Predicted miRNA Targets generated by dSNPs: | 180 |
| SNP-miRNA Target pairs (distances): | 3,361,770 |
| 1 For detailed breakdown see below | |
miRdSNP v11.03 Detailed Summary
| RefSeq | |
| Indexed in miRdSNP 1 | |
| 3'UTR RefSeq Genes: | 19,834 |
| Source UCSC (RefSeq Genes Track) | |
| Total RefSeq records: | 32,876 |
| 1 If a gene had multiple transcripts we selected the one with the longest sequence length. | |
| SNPs | |
| Indexed in miRdSNP 1,2 | |
| 3'UTR SNPs: | 175,351 |
| 3'UTR Genes: | 16810 |
| dSNPs: | 630 |
| Disease-SNP pairs: | 786 |
| Diseases: | 204 |
| PubMed IDs: | 754 |
| Source dbSNP 130 (UCSC hg18) | |
| Total records: | 18,833,531 |
| Unique SNPs: | 17,525,882 |
| 1 SNPs aligning to more than 1 locus were excluded (weight > 1) | |
| 2 SNPs mapping to intron regions on 3'UTR genes were excluded | |
| TargetScan | |
| Indexed in miRdSNP 1,2 | |
| miRNA Targets: | 117,929 |
| miRNA Families: | 153 |
| miRBase IDs: | 249 |
| Seed Match 7mer-1a: | 27,146 |
| Seed Match 7mer-m8: | 48,287 |
| Seed Match 8mer: | 42,496 |
| 3'UTR Genes: | 9,246 |
| Source TargetScan 5.1 | |
| Total records: | 54,193 |
| Unique miRNA Targets by miRBase ID: | 119,199 |
| 1 miRNA Targets mapping to intron regions on 3'UTR genes were excluded | |
| 2 Individual miRBase IDs were harvested from miR_Family_Info.txt provided by TargetScan | |
| PicTar | |
| Indexed in miRdSNP 1,2 | |
| PicTar 4-way miRNA Targets: | 62,483 |
| PicTar 4-way miRBase IDs: | 197 |
| PicTar 5-way miRNA Targets: | 23,248 |
| PicTar 5-way miRBase IDs: | 193 |
| Source PicTar | |
| Total PicTar 4-way records: | 66,938 |
| Total PicTar 5-way records: | 34,231 |
| 1 miRNA Targets mapping to intron regions on 3'UTR genes were excluded | |
| 2 miRNA Targets referencing dead miRBase IDs (miRNA.dead) were resolved if possible or excluded | |
